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JOELib2 is the redesigned Java successor of the OELib library. The C++ analogue successor is OpenBabel. So, JOELib and OpenBabel uses the same chemical expert system (with some marginal differences). The commercial successor of OELib is OEChem, which now also supports free licenses for non--commercial products.

JOELib2 is a Cheminformatics algorithm library, which was designed for prototyping, data mining, graph mining, and of course algorithm development. It has not really a Graphical User Interface (GUI) and should not be used for high-throughput tasks. Anyway, a primitive 2D rendering and Java3D rendering are also part of this library. Several programming interfaces are provided.

JOELib2 is Open Source and competitive.

Features Chemical expert system and Algorithms Structured Data Mining Atom pair feature Clique detection Bron-Kerbosch DFMax Optimal Assignment Kernel (OA) - graph kernel, molecule kernel Vectorial Data Mining (Chemical and biological) feature calculation, e.g. BCUT, RDF, Autocorrelation, LogP, MR, TPSA, ... Weka mining interface with molecule support
[edit] Documentation Please check the [old page] until the documentation was updated. API documentation JOELib JOELib2 Tutorial JOELib JOELib2 Wikipedia JOELib Cheminformatics Data Mining Machine Learning	Support Download License: GPL @Wikipedia @gnu.org Language: Java File releases Tracker Bug reporting Feature requests Mailing list Developer request Help request Development CVS Repository Software engineering SourceForge project Frequently Asked Questions (FAQ)
References Cheminformatics and mining literature references Famous cheminformatics and mining quotations